Box plots and violin plots in R Programming - Cheat Sheet & Quick Revision

Recall & Review

beginner

What is a box plot used for in data visualization?

A box plot shows the distribution of data by displaying the median, quartiles, and possible outliers. It helps to understand the spread and skewness of the data.

intermediate

What extra information does a violin plot provide compared to a box plot?

A violin plot shows the data distribution's density shape along with the summary statistics like median and quartiles, giving a fuller picture of the data spread.

beginner

In R, which package is commonly used to create box plots and violin plots?

The ggplot2 package is commonly used in R to create both box plots and violin plots with easy and flexible syntax.

beginner

What does the 'geom_boxplot()' function do in ggplot2?

The 'geom_boxplot()' function adds a box plot layer to a ggplot, showing median, quartiles, and outliers of the data.

beginner

How do you add a violin plot layer in ggplot2?

You add a violin plot layer using the 'geom_violin()' function, which shows the data distribution shape along with summary statistics.

What does the thick line inside a box plot represent?

A The mean of the data

B The median of the data

C The maximum value

D The minimum value

The thick line inside a box plot shows the median, which is the middle value of the data.

Which R function adds a violin plot layer in ggplot2?

A geom_boxplot()

B geom_density()

C geom_violin()

D geom_histogram()

The 'geom_violin()' function adds a violin plot layer showing data distribution shape.

What does a violin plot show that a box plot does not?

A Data density distribution

B Quartiles

C Outliers

D Median value

Violin plots show the density distribution of the data, which box plots do not.

In a box plot, what do the 'whiskers' represent?

A The range of the data excluding outliers

B The mean and median

C The density of the data

D The mode of the data

Whiskers extend to the smallest and largest values within 1.5 times the interquartile range, excluding outliers.

Which package must you load to use 'geom_boxplot()' and 'geom_violin()' in R?

A shiny

B dplyr

C tidyr

D ggplot2

The ggplot2 package provides 'geom_boxplot()' and 'geom_violin()' functions.

Explain the differences and similarities between box plots and violin plots.

Think about what each plot shows about the data shape and summary.

Describe how to create a box plot and a violin plot in R using ggplot2.

Focus on the functions and steps needed in ggplot2.

Practice

1. What does a box plot primarily show about a dataset?

easy

A. The median, quartiles, and potential outliers

B. The exact frequency of each data point

C. The shape and density of the data distribution

D. Only the minimum and maximum values

Solution

1. Step 1: Understand box plot components

   A box plot displays the median line, the box showing the interquartile range (Q1 to Q3), and whiskers for minimum and maximum values excluding outliers.

2. Step 2: Compare options to box plot features

   The median, quartiles, and potential outliers correctly describes median, quartiles, and outliers. The shape and density of the data distribution describes violin plots, not box plots.

3. Final Answer:

   The median, quartiles, and potential outliers -> Option A

4. Quick Check:

   Box plot = median + quartiles + outliers [OK]

Hint: Box plots show median and spread, violin plots show density [OK]

Common Mistakes:

• Confusing violin plot features with box plot
• Thinking box plot shows exact data frequencies
• Ignoring outliers in box plot

2. Which of the following R commands correctly creates a violin plot using ggplot2 for a dataset df with numeric variable value and group category?

easy

A. ggplot(df, aes(x=category, y=value)) + geom_violin()

B. ggplot(df, aes(x=value, y=category)) + geom_boxplot()

C. plot(df$value, df$category, type='violin')

D. ggplot(df, aes(x=category, y=value)) + geom_histogram()

Solution

1. Step 1: Identify correct ggplot2 syntax for violin plot

   The correct syntax uses ggplot with aes mapping x to category and y to value, then adds geom_violin() to create violin plots.

2. Step 2: Check each option

   ggplot(df, aes(x=category, y=value)) + geom_violin() matches correct syntax. ggplot(df, aes(x=value, y=category)) + geom_boxplot() swaps x and y and uses boxplot, not violin. plot(df$value, df$category, type='violin') uses base plot with invalid type. ggplot(df, aes(x=category, y=value)) + geom_histogram() uses histogram, not violin plot.

3. Final Answer:

   ggplot(df, aes(x=category, y=value)) + geom_violin() -> Option A

4. Quick Check:

   Violin plot = ggplot + aes(x=group, y=num) + geom_violin() [OK]

Hint: Use geom_violin() with x=group, y=value in ggplot [OK]

Common Mistakes:

• Swapping x and y aesthetics
• Using geom_boxplot() instead of geom_violin()
• Trying base plot with invalid type argument

3. Given the following R code, what will be the output plot type?

library(ggplot2)
df <- data.frame(group = rep(c('A', 'B'), each=10), value = c(rnorm(10), rnorm(10, 2)))
ggplot(df, aes(x=group, y=value)) + geom_boxplot() + geom_violin(alpha=0.3)

medium

A. An error because you cannot combine geom_boxplot and geom_violin

B. Only box plots for groups A and B

C. Only violin plots for groups A and B

D. A combined plot showing both box plots and transparent violin plots for groups A and B

Solution

1. Step 1: Understand layering in ggplot2

   ggplot2 allows adding multiple geoms. Here, geom_boxplot() adds box plots, and geom_violin(alpha=0.3) adds violin plots with transparency.

2. Step 2: Interpret the combined plot

   The plot will show box plots overlaid on transparent violin plots for each group, allowing comparison of distribution shape and summary statistics.

3. Final Answer:

   A combined plot showing both box plots and transparent violin plots for groups A and B -> Option D

4. Quick Check:

   Multiple geoms = combined plot [OK]

Hint: Multiple geoms layer plots; transparency shows both [OK]

Common Mistakes:

• Thinking layering causes error
• Expecting only one plot type to show
• Ignoring alpha transparency effect

4. Identify the error in this R code snippet intended to create a box plot:

library(ggplot2)
df <- data.frame(group = c('X', 'Y', 'X', 'Y'), value = c(5, 7, 6, 8))
ggplot(df, aes(x=value, y=group)) + geom_boxplot()

medium

A. geom_boxplot() cannot be used with categorical variables

B. Missing + sign before geom_boxplot()

C. The x and y aesthetics are swapped; x should be group and y should be value

D. The data frame is missing numeric values

Solution

1. Step 1: Check aesthetic mappings for box plot

   Box plots require the categorical variable on the x-axis and numeric variable on the y-axis to show distribution per group.

2. Step 2: Identify the swapped aesthetics

   The code uses x=value (numeric) and y=group (categorical), which is reversed. It should be x=group and y=value.

3. Final Answer:

   The x and y aesthetics are swapped; x should be group and y should be value -> Option C

4. Quick Check:

   Box plot: x=category, y=numeric [OK]

Hint: Box plot x = group, y = numeric value [OK]

Common Mistakes:

• Swapping x and y in aes()
• Assuming geom_boxplot needs numeric x
• Ignoring axis roles in box plots

5. You have a dataset with three groups and numeric scores. You want to visualize both the distribution shape and summary statistics for each group in one plot. Which R code snippet best achieves this?

hard

A. ggplot(data, aes(x=group, y=score)) + geom_histogram() + geom_boxplot()

B. ggplot(data, aes(x=group, y=score)) + geom_violin(trim=FALSE) + geom_boxplot(width=0.1, fill='white')

C. ggplot(data, aes(x=score, y=group)) + geom_violin() + geom_point()

D. ggplot(data, aes(x=group, y=score)) + geom_point() + geom_line()

Solution

1. Step 1: Understand the goal

   The goal is to show distribution shape (violin plot) and summary statistics (box plot) together per group.

2. Step 2: Evaluate each option

   ggplot(data, aes(x=group, y=score)) + geom_violin(trim=FALSE) + geom_boxplot(width=0.1, fill='white') overlays violin plot with trim=FALSE (shows full distribution) and a narrow box plot with white fill for clarity. ggplot(data, aes(x=score, y=group)) + geom_violin() + geom_point() swaps axes and adds points but misses box plot summary. ggplot(data, aes(x=group, y=score)) + geom_histogram() + geom_boxplot() mixes histogram (not grouped) with box plot incorrectly. ggplot(data, aes(x=group, y=score)) + geom_point() + geom_line() shows points and lines, not distribution or summary.

3. Final Answer:

   ggplot(data, aes(x=group, y=score)) + geom_violin(trim=FALSE) + geom_boxplot(width=0.1, fill='white') -> Option B

4. Quick Check:

   Violin + boxplot overlay = full distribution + summary [OK]

Hint: Overlay violin and narrow boxplot for full view [OK]

Common Mistakes:

• Using histogram instead of violin for distribution
• Swapping x and y axes
• Not combining plots to show both shape and stats